STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL10441.1Nucleoside transporter. (408 aa)    
Predicted Functional Partners:
SHL10378.1
Sugar phosphate isomerase/epimerase.
 
    0.810
SHL10501.1
Predicted dehydrogenase.
 
     0.759
SHL10342.1
Choline dehydrogenase.
 
     0.718
SHL10407.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.712
SHL10308.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.705
SHL64047.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
     0.688
SHL10469.1
Fucose permease.
  
    0.614
SHL10641.1
Protein of unknown function.
 
     0.594
SHL10614.1
Protein of unknown function.
 
     0.552
SHK15903.1
Gluconate 2-dehydrogenase subunit 3.
 
     0.519
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.