STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL30813.1UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (247 aa)    
Predicted Functional Partners:
SHL30851.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.999
SHL30882.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.999
SHK62483.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.874
SHK70351.1
Glutamine synthetase.
   
 
  0.828
SHL30786.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
    0.758
SHL22837.1
Citrate synthase; Belongs to the citrate synthase family.
   
    0.615
SHK33531.1
L-proline dehydrogenase.
   
 
  0.604
SHL37055.1
L-proline dehydrogenase.
   
 
  0.604
SHK76964.1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
   
    0.537
SHL31111.1
Glyceraldehyde-3-phosphate dehydrogenase (NADP+).
  
 
  0.522
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.