Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHK76639.1 | SHL35307.1 | SAMN05216293_1901 | SAMN05216293_3281 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Superfamily II DNA or RNA helicase. | 0.639 |
| SHK76639.1 | polA | SAMN05216293_1901 | SAMN05216293_1346 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| SHK76639.1 | rpoA | SAMN05216293_1901 | SAMN05216293_2985 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.574 |
| SHK76639.1 | rpoB | SAMN05216293_1901 | SAMN05216293_2127 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.494 |
| SHK76639.1 | rpoC | SAMN05216293_1901 | SAMN05216293_2128 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.447 |
| SHK85148.1 | SHL35307.1 | SAMN05216293_2043 | SAMN05216293_3281 | Hypothetical protein. | Superfamily II DNA or RNA helicase. | 0.645 |
| SHL21113.1 | SHL35307.1 | SAMN05216293_2925 | SAMN05216293_3281 | Hypothetical protein. | Superfamily II DNA or RNA helicase. | 0.683 |
| SHL35307.1 | SHK76639.1 | SAMN05216293_3281 | SAMN05216293_1901 | Superfamily II DNA or RNA helicase. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.639 |
| SHL35307.1 | SHK85148.1 | SAMN05216293_3281 | SAMN05216293_2043 | Superfamily II DNA or RNA helicase. | Hypothetical protein. | 0.645 |
| SHL35307.1 | SHL21113.1 | SAMN05216293_3281 | SAMN05216293_2925 | Superfamily II DNA or RNA helicase. | Hypothetical protein. | 0.683 |
| SHL35307.1 | SHL44433.1 | SAMN05216293_3281 | SAMN05216293_3488 | Superfamily II DNA or RNA helicase. | Sialidase-1. | 0.674 |
| SHL35307.1 | SHL44621.1 | SAMN05216293_3281 | SAMN05216293_3493 | Superfamily II DNA or RNA helicase. | Sialidase-1. | 0.674 |
| SHL35307.1 | SHL59406.1 | SAMN05216293_3281 | SAMN05216293_3853 | Superfamily II DNA or RNA helicase. | RNA polymerase Rpb6. | 0.990 |
| SHL35307.1 | polA | SAMN05216293_3281 | SAMN05216293_1346 | Superfamily II DNA or RNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.977 |
| SHL35307.1 | rpoA | SAMN05216293_3281 | SAMN05216293_2985 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.991 |
| SHL35307.1 | rpoB | SAMN05216293_3281 | SAMN05216293_2127 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
| SHL35307.1 | rpoC | SAMN05216293_3281 | SAMN05216293_2128 | Superfamily II DNA or RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.903 |
| SHL44433.1 | SHL35307.1 | SAMN05216293_3488 | SAMN05216293_3281 | Sialidase-1. | Superfamily II DNA or RNA helicase. | 0.674 |
| SHL44621.1 | SHL35307.1 | SAMN05216293_3493 | SAMN05216293_3281 | Sialidase-1. | Superfamily II DNA or RNA helicase. | 0.674 |
| SHL59406.1 | SHL35307.1 | SAMN05216293_3853 | SAMN05216293_3281 | RNA polymerase Rpb6. | Superfamily II DNA or RNA helicase. | 0.990 |
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