STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL36854.1Response regulator receiver domain-containing protein. (514 aa)    
Predicted Functional Partners:
SHL35501.1
Hypothetical protein.
  
 0.851
SHK90486.1
PAS domain S-box-containing protein.
   
 0.832
SHL36889.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; Manually curated.
       0.818
SHK08877.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 
 0.803
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
     0.787
SHK30893.1
Ligand-binding sensor domain-containing protein.
  
0.777
SHL20652.1
Hypothetical protein.
  
     0.770
SHK87707.1
Protein of unknown function.
 
 
  0.767
SHL36722.1
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
  0.698
SHK71019.1
PAS/PAC sensor signal transduction histidine kinase.
   
 0.690
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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