STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL37975.1N-terminal double-transmembrane domain-containing protein. (640 aa)    
Predicted Functional Partners:
SHL38036.1
Uncharacterized membrane protein.
 
     0.851
SHL35881.1
Magnesium chelatase subunit I.
  
 0.847
SHL38003.1
Dihydroorotase.
       0.818
SHL38071.1
Phospholipase/carboxylesterase.
       0.805
SHL16148.1
Tetratricopeptide repeat-containing protein.
 
     0.788
SHK52289.1
Protein of unknown function DUF58.
  
    0.780
SHL36559.1
Hypothetical protein.
 
     0.776
SHK17050.1
Hypothetical protein.
  
     0.775
SHK74268.1
Protein of unknown function.
 
     0.774
SHK93126.1
Hypothetical protein; Manually curated.
  
     0.772
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.