STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL44314.1Transporter, SSS family. (889 aa)    
Predicted Functional Partners:
SHL44433.1
Sialidase-1.
 
     0.805
SHL44354.1
Sialate O-acetylesterase.
 
     0.802
SHL44469.1
N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
 0.649
SHL35501.1
Hypothetical protein.
     
 0.643
SHL44391.1
PKD repeat-containing protein.
    
  0.611
SHL44621.1
Sialidase-1.
 
     0.557
SHL44584.1
DNA-binding transcriptional regulator, FadR family.
 
     0.537
SHL44541.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.500
SHL44510.1
Starch-binding associating with outer membrane.
 
     0.460
SHK33531.1
L-proline dehydrogenase.
  
    0.413
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.