STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL66515.1Protein of unknown function. (189 aa)    
Predicted Functional Partners:
SHL66484.1
Exodeoxyribonuclease-5.
       0.743
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.699
SHL66580.1
Putative hydrolase of the HAD superfamily.
       0.684
SHL66617.1
3-deoxy-alpha-D-manno-octulosonate 8-oxidase.
       0.666
SHL66652.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.608
SHK08908.1
Hypothetical protein.
  
     0.565
SHL66450.1
Hypothetical protein.
       0.539
SHL66384.1
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD.
       0.533
SHL66409.1
Protein of unknown function.
       0.533
SHL37531.1
Protein of unknown function.
  
     0.528
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.