STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ70764.1PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. (190 aa)    
Predicted Functional Partners:
AFZ69944.1
UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases.
 
 
 0.993
AFZ70499.1
UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases.
 
  
 0.931
AFZ70763.1
DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme; PFAM: DeoC/LacD family aldolase.
       0.639
AFZ69991.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
     
 0.597
AFZ70762.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
       0.455
AFZ70161.1
Molybdopterin converting factor, large subunit; PFAM: ThiS family; MoaE protein.
     
 0.436
Your Current Organism:
Caldisphaera lagunensis
NCBI taxonomy Id: 1056495
Other names: C. lagunensis DSM 15908, Caldisphaera lagunensis DSM 15908, Caldisphaera lagunensis IC-154, Caldisphaera lagunensis JCM 11604, Caldisphaera lagunensis str. DSM 15908, Caldisphaera lagunensis strain DSM 15908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.