STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5807_04342Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
B5807_06123
t-SNARE coiled-coil homology domain-containing protein.
    
 0.880
B5807_11828
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.805
B5807_00571
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.805
B5807_05000
t-SNARE coiled-coil homology domain-containing protein.
     
 0.773
B5807_07206
Arf-GAP domain-containing protein.
  
  
  0.605
B5807_08548
Uncharacterized protein.
   
 
  0.556
B5807_03416
Uncharacterized protein.
     
 0.550
B5807_12020
PX domain-containing protein.
     
 0.547
B5807_08940
t-SNARE coiled-coil homology domain-containing protein.
    
 0.514
B5807_07027
PhoD_N domain-containing protein.
    
  0.422
Your Current Organism:
Epicoccum nigrum
NCBI taxonomy Id: 105696
Other names: ATCC 24428 [[Phoma epicoccina]], CBS 173.73 [[Phoma epicoccina]], E. nigrum, Epicoccum nigrum Link, 2015, Epicoccum purpurascens, Epicoccum sp. SGSGf34, IMI 164070 [[Phoma epicoccina]], Phoma epicoccina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.