STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacsin1b_2Protein kinase C and casein kinase substrate in neurons protein 1. (472 aa)    
Predicted Functional Partners:
B7P43_G17527
WH2 domain-containing protein.
    
 
 0.774
B7P43_G11221
Uncharacterized protein.
    
 0.745
B7P43_G03632
Uncharacterized protein.
    
 
 0.677
B7P43_G08899
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.553
shi
Dynamin.
    
 
 0.553
DNM1L_3
Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.553
B7P43_G05861
Formin-binding protein 1-like protein.
    
 
 0.536
RhoGAP100F
Rho GTPase-activating protein 100F.
      
 0.504
Rab9b
Ras-related protein Rab-9B.
      
 0.491
EHD1_3
EH domain-containing protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.433
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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