Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPON1_3Spondin-1. (769 aa)    
Predicted Functional Partners:
GID8_1
Glucose-induced degradation protein 8-like protein.
    
   0.649
B7P43_G17384
Uncharacterized protein.
     
 0.616
rmnd5a
RMD5-like protein A.
    
   0.482
B7P43_G02783
Uncharacterized protein.
     
 0.468
B7P43_G13095
Uncharacterized protein.
  
  
 0.457
B7P43_G09559
Thrombospondin type-1 domain-containing protein 7B.
     
  0.428
APP_1
Amyloid beta A4 protein.
     
 0.400
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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