STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P43_G06303RNA-binding protein squid. (349 aa)    
Predicted Functional Partners:
B7P43_G10387
Heterogeneous nuclear ribonucleoprotein 27C.
  
0.954
sqd_0
RNA-binding protein squid.
  
  
 
0.915
B7P43_G02604
Uncharacterized protein.
    
 
 0.906
B7P43_G01153
RRM domain-containing protein.
  
 
 0.868
Tnpo1_1
Transportin-1.
    
 
 0.803
B52
Serine-arginine protein 55.
  
 0.760
B7P43_G07575
Heterogeneous nuclear ribonucleoprotein H2.
   
 0.745
SRSF1
Serine/arginine-rich splicing factor 1.
  
 
 0.734
B7P43_G05595
RNA-binding protein Musashi-like protein Rbp6.
  
0.732
B7P43_G11615
RRM domain-containing protein.
  
 
 0.725
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.