STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P43_G06547HTH_48 domain-containing protein. (218 aa)    
Predicted Functional Partners:
B7P43_G16561
Uncharacterized protein.
    
 0.569
eed
Polycomb protein eed.
    
 0.549
His4_2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.546
B7P43_G15637
Uncharacterized protein.
    
 0.530
suz12b_1
Polycomb protein suz12-B.
    
 0.527
Caf1
Putative histone-binding protein Caf1.
    
 0.521
RpL40
Ubiquitin-60S ribosomal protein L40.
    
  0.441
ash2_2
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.428
Rbbp5_1
Retinoblastoma-binding protein 5-like protein.
    
 0.428
B7P43_G16205
P53 domain-containing protein.
    
  0.428
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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