STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P43_G07644HMG box domain-containing protein. (470 aa)    
Predicted Functional Partners:
Tfb1_2
General transcription factor IIH subunit 1.
    
 0.896
Arp8_1
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.896
GTF2H3
General transcription factor IIH subunit 3.
    
 0.890
B7P43_G17031
DNA excision repair protein haywire.
   
 0.888
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.879
B7P43_G02366
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.875
GTF2H2_3
General transcription factor IIH subunit.
    
 0.874
ACTL6B
Actin-like protein 6B; Belongs to the actin family.
   
 0.866
B7P43_G02017
Actin-related protein 5; Belongs to the actin family.
    
 0.865
B7P43_G01164
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.859
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.