STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kctd5BTB/POZ domain-containing protein KCTD5. (215 aa)    
Predicted Functional Partners:
Cul3_1
Cullin-3; Belongs to the cullin family.
    
 
 0.961
Cul1_2
Cullin-1; Belongs to the cullin family.
    
 
 0.921
B7P43_G07199
Cullin domain-containing protein; Belongs to the cullin family.
    
 
 0.831
ube2ia
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
 
  
 
 0.799
smo-1
Small ubiquitin-related modifier.
     
 0.667
B7P43_G10192
Ubiquitin-like domain-containing protein.
     
 0.641
Shal
Potassium voltage-gated channel protein Shal; Belongs to the potassium channel family.
    
 
 0.577
B7P43_G05113
DUF3399 domain-containing protein.
    
 
 0.577
B7P43_G16142
Uncharacterized protein; Belongs to the RecA family.
    
   0.557
B7P43_G16143
RECA_2 domain-containing protein.
    
   0.557
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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