STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P43_G00688WD_REPEATS_REGION domain-containing protein. (190 aa)    
Predicted Functional Partners:
Atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.987
Atg12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.985
B7P43_G03156
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.984
ATG3
Autophagy-related protein 3.
   
 0.981
COS41.2
Putative Ras-related protein Rab-33.
    
 0.969
B7P43_G00746
ATG11 domain-containing protein.
   
 0.959
unc-51
Serine/threonine-protein kinase unc-51.
    
 
 0.928
B7P43_G01415
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 
 0.926
B7P43_G00690
WD_REPEATS_REGION domain-containing protein.
 
      0.899
Atg6
Beclin-1-like protein.
    
 0.892
Your Current Organism:
Cryptotermes secundus
NCBI taxonomy Id: 105785
Other names: C. secundus
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