STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW02826.1Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family. (105 aa)    
Predicted Functional Partners:
SDX15996.1
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.965
SDX21312.1
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.959
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.560
SDX24607.1
Modular FeS cluster scaffolding protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
   
 
 0.554
SDW02849.1
Ankyrin repeat-containing protein.
   
   0.526
SDX54821.1
V8-like Glu-specific endopeptidase.
  
 
   0.525
SDW03033.1
LysM domain-containing protein.
  
    0.416
SDW02797.1
Hypothetical protein.
       0.407
SDW60946.1
RNA polymerase-associated protein.
 
  
 0.402
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.