STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW05793.1Glycosyltransferase. (249 aa)    
Predicted Functional Partners:
SDW04356.1
Glycosyl transferase family 2.
  
  
  0.756
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
  0.688
SDW83445.1
Glycosyl transferase family 2.
  
     0.688
SDW62275.1
Methyltransferase domain-containing protein.
  
     0.659
SDX00345.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.644
SDW04581.1
Glycosyltransferase, GT2 family.
 
 
  0.532
SDX31094.1
Glycosyltransferase, GT2 family.
  
     0.521
SDW62224.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.505
SDW99405.1
Glycosyltransferase, GT2 family.
 
 
 0.502
SDW99418.1
Glycosyltransferase, GT2 family.
 
  
  0.441
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.