STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW11260.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
SDW81152.1
WD40-like Beta Propeller Repeat.
   
 
 0.908
SDW44881.1
Periplasmic chaperone for outer membrane proteins Skp; Belongs to the skp family.
    
 
 0.783
SDX28031.1
Periplasmic chaperone for outer membrane proteins Skp.
    
 
 0.783
SDX32590.1
Esterase/lipase superfamily enzyme.
  
     0.725
SDX35230.1
Uncharacterized membrane protein.
  
    0.722
SDW11198.1
Helix-turn-helix domain-containing protein.
 
     0.707
SDX24083.1
Esterase/lipase superfamily enzyme.
  
     0.689
SDX65484.1
Hypothetical protein.
 
     0.685
SDW02660.1
Cytochrome c-type protein NapC/trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC.
 
   0.681
SDX47781.1
2OG-Fe(II) oxygenase superfamily protein.
  
     0.678
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.