STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW13706.1Two-component system, OmpR family, sensor histidine kinase QseC. (447 aa)    
Predicted Functional Partners:
SDW13678.1
Two-component system, OmpR family, response regulator QseB.
 0.987
SDW02191.1
PAS domain S-box-containing protein.
 
 0.983
SDW45752.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.977
SDW71819.1
Dihydrolipoamide dehydrogenase.
   
 0.961
SDX25568.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.959
SDW39410.1
PAS domain S-box-containing protein.
 
0.920
SDX34915.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.919
SDX67412.1
PAS domain-containing protein.
   
 0.886
SDW22379.1
Response regulator receiver domain-containing protein.
  
 0.863
SDW18522.1
Two-component response regulator, PleD family, consists of two REC domains and a diguanylate cyclase (GGDEF) domain.
  
 0.861
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.