STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW22234.1Predicted nucleic acid-binding protein, contains PIN domain. (143 aa)    
Predicted Functional Partners:
SDX25050.1
Ribbon-helix-helix protein, copG family.
   
   0.828
SDW22208.1
Hypothetical protein.
       0.618
SDW70792.1
Adenosylcobinamide amidohydrolase.
  
     0.613
SDX06094.1
Hypothetical protein.
  
     0.492
SDW93920.1
Methyl-accepting chemotaxis protein.
  
     0.463
SDX46814.1
Methyl-accepting chemotaxis protein/hemerythrin.
  
     0.463
SDW94564.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.