STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW23345.1Transglutaminase-like enzyme, putative cysteine protease. (321 aa)    
Predicted Functional Partners:
SDW11833.1
Uncharacterized conserved protein, Alpha-E superfamily.
  
 0.979
SDW23321.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.972
SDW95083.1
Uncharacterized conserved protein, Alpha-E superfamily.
  
 0.941
SDW11805.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.825
SDW95108.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.825
SDW57330.1
Putative amidoligase enzyme.
     0.799
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.711
SDW23285.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.558
SDW93436.1
GMP synthase-Glutamine amidotransferase.
  
 
  0.452
SDW23253.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.421
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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