STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW23479.1Hypothetical protein. (418 aa)    
Predicted Functional Partners:
SDW23442.1
Hypothetical protein.
       0.773
SDX05876.1
N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated.
  
     0.733
SDX15097.1
General secretion pathway protein M.
  
     0.695
SDW24251.1
Protein of unknown function.
  
     0.684
SDX15159.1
General secretion pathway protein J.
  
     0.620
SDX05901.1
Hypothetical protein.
  
     0.548
SDX15121.1
General secretion pathway protein L.
  
     0.531
SDW23386.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
       0.512
SDW23417.1
Acetyltransferase (GNAT) family protein.
       0.512
SDX18445.1
Oxygen tolerance.
  
     0.485
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.