STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW23929.1Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (286 aa)    
Predicted Functional Partners:
SDW23955.1
Cobalt/nickel transport system permease protein.
 
 0.999
cbiM
Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.998
SDW48131.1
Cobalt/nickel transport system permease protein.
 
 0.994
cbiN
Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.986
SDW12017.1
Cobalt/nickel transport system permease protein.
 
 0.925
msbA
ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
  
 
0.861
SDX64704.1
ABC-type Co2+ transport system, permease component.
  
 0.856
SDX21587.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.811
SDW32256.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.807
SDX34762.1
ATP-binding cassette, subfamily C, CydD.
    
0.800
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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