STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW24320.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SDX04765.1
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
   
 
 0.961
SDX04795.1
Photosynthetic reaction center L subunit.
   
 
 0.961
SDW47860.1
Outer membrane protein OmpA.
   
 
 0.943
SDX04736.1
Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
   
 
 0.943
SDX04686.1
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
 
 0.919
pufB1
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
 
 0.919
SDX04664.1
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
   
 
 0.917
SDX04719.1
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
   
 
 0.917
SDX04814.1
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
   
 
 0.917
SDW68847.1
Osmoprotectant transport system permease protein.
  
    0.803
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.