STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW24924.12-oxoglutarate ferredoxin oxidoreductase subunit alpha. (584 aa)    
Predicted Functional Partners:
SDW24891.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 0.999
SDW67414.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SDX53365.1
Ferredoxin-type protein NapG.
  
 0.998
SDX62154.1
Ferredoxin-type protein NapG.
  
 0.981
SDW19357.1
NADPH-dependent glutamate synthase beta chain.
  
 0.974
SDW89715.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.960
SDW24859.1
Rubrerythrin.
 
  
 0.952
SDW82080.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.952
SDX29980.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.952
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.