Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW19118.1 | SDW19134.1 | SAMN05421783_10245 | SAMN05421783_10246 | Uncharacterized membrane protein. | Hypothetical protein. | 0.443 |
SDW19118.1 | SDW19156.1 | SAMN05421783_10245 | SAMN05421783_10247 | Uncharacterized membrane protein. | Iron-sulfur cluster assembly protein. | 0.415 |
SDW19134.1 | SDW19118.1 | SAMN05421783_10246 | SAMN05421783_10245 | Hypothetical protein. | Uncharacterized membrane protein. | 0.443 |
SDW19134.1 | SDW19156.1 | SAMN05421783_10246 | SAMN05421783_10247 | Hypothetical protein. | Iron-sulfur cluster assembly protein. | 0.737 |
SDW19134.1 | cbiA | SAMN05421783_10246 | SAMN05421783_10248 | Hypothetical protein. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.447 |
SDW19156.1 | SDW19118.1 | SAMN05421783_10247 | SAMN05421783_10245 | Iron-sulfur cluster assembly protein. | Uncharacterized membrane protein. | 0.415 |
SDW19156.1 | SDW19134.1 | SAMN05421783_10247 | SAMN05421783_10246 | Iron-sulfur cluster assembly protein. | Hypothetical protein. | 0.737 |
SDW19156.1 | cbiA | SAMN05421783_10247 | SAMN05421783_10248 | Iron-sulfur cluster assembly protein. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.509 |
cbiA | SDW19134.1 | SAMN05421783_10248 | SAMN05421783_10246 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Hypothetical protein. | 0.447 |
cbiA | SDW19156.1 | SAMN05421783_10248 | SAMN05421783_10247 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Iron-sulfur cluster assembly protein. | 0.509 |