STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW19357.1NADPH-dependent glutamate synthase beta chain. (654 aa)    
Predicted Functional Partners:
SDW67414.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 0.999
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
SDX14982.1
Glutamate synthase (NADH) large subunit.
 0.999
SDW02287.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.997
SDX07678.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
 
 
 0.993
SDW22758.1
Sulfite reductase, subunit B.
 
 0.978
SDX21680.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 
 0.976
SDW24924.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.974
SDW82936.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
 
 
 0.974
SDX14071.1
Hypothetical protein.
   
 0.971
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.