Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW11144.1 | SDW23253.1 | SAMN05421783_101438 | SAMN05421783_102184 | acyl-CoA dehydrogenase. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.963 |
SDW11144.1 | SDW34378.1 | SAMN05421783_101438 | SAMN05421783_103113 | acyl-CoA dehydrogenase. | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. | 0.884 |
SDW11144.1 | SDW67414.1 | SAMN05421783_101438 | SAMN05421783_10713 | acyl-CoA dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.951 |
SDW11144.1 | SDX05058.1 | SAMN05421783_101438 | SAMN05421783_11331 | acyl-CoA dehydrogenase. | O-succinylbenzoic acid--CoA ligase. | 0.649 |
SDW11144.1 | SDX09859.1 | SAMN05421783_101438 | SAMN05421783_11423 | acyl-CoA dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.954 |
SDW11144.1 | acpP | SAMN05421783_101438 | SAMN05421783_11455 | acyl-CoA dehydrogenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.599 |
SDW11144.1 | menB | SAMN05421783_101438 | SAMN05421783_109181 | acyl-CoA dehydrogenase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). | 0.671 |
SDW23253.1 | SDW11144.1 | SAMN05421783_102184 | SAMN05421783_101438 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | acyl-CoA dehydrogenase. | 0.963 |
SDW23253.1 | SDW34378.1 | SAMN05421783_102184 | SAMN05421783_103113 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. | 0.971 |
SDW23253.1 | SDW67414.1 | SAMN05421783_102184 | SAMN05421783_10713 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.944 |
SDW23253.1 | SDW85446.1 | SAMN05421783_102184 | SAMN05421783_109179 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Isochorismate synthase. | 0.669 |
SDW23253.1 | SDX05058.1 | SAMN05421783_102184 | SAMN05421783_11331 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | O-succinylbenzoic acid--CoA ligase. | 0.970 |
SDW23253.1 | SDX09859.1 | SAMN05421783_102184 | SAMN05421783_11423 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.946 |
SDW23253.1 | acpP | SAMN05421783_102184 | SAMN05421783_11455 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.973 |
SDW23253.1 | menB | SAMN05421783_102184 | SAMN05421783_109181 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). | 0.720 |
SDW23253.1 | menC | SAMN05421783_102184 | SAMN05421783_109183 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.698 |
SDW23253.1 | menD | SAMN05421783_102184 | SAMN05421783_109180 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.423 |
SDW34378.1 | SDW11144.1 | SAMN05421783_103113 | SAMN05421783_101438 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. | acyl-CoA dehydrogenase. | 0.884 |
SDW34378.1 | SDW23253.1 | SAMN05421783_103113 | SAMN05421783_102184 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.971 |
SDW34378.1 | SDW67414.1 | SAMN05421783_103113 | SAMN05421783_10713 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.769 |
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