STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW46114.1Hypothetical protein. (337 aa)    
Predicted Functional Partners:
SDX16085.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.763
SDW82710.1
Protein of unknown function.
  
     0.751
SDX23911.1
SAM-dependent methyltransferase, MidA family.
  
     0.710
SDW34697.1
Uncharacterized conserved protein, contains Mth938-like domain.
 
     0.708
bioC
malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
     0.658
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
     
 0.601
SDW02475.1
CNP1-like family protein.
  
     0.599
SDW46137.1
Amino acid/polyamine/organocation transporter, APC superfamily.
       0.576
SDW33829.1
Beta-barrel assembly machine subunit BamC.
  
     0.561
SDX57089.1
Hypothetical protein.
  
     0.533
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.