STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW82859.1NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (494 aa)    
Predicted Functional Partners:
SDW82936.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
 
 
 0.985
SDW82889.1
NAD-reducing hydrogenase small subunit.
 
 0.974
SDX07678.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
   
 0.958
SDX07722.1
NAD(P)-dependent nickel-iron dehydrogenase subunit HoxY.
 
 0.955
SDW22800.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
 
 0.946
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.911
SDW67414.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.909
SDW82910.1
[NiFe] hydrogenase diaphorase moiety small subunit.
 
   
 0.830
SDW23763.1
Hydrogenase maturation protease.
 
  
 0.797
SDX07774.1
Hydrogenase maturation protease.
 
  
 0.785
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.