STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW90134.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (260 aa)    
Predicted Functional Partners:
SDW90112.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 0.999
SDW90156.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SDW12091.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.997
SDW90088.1
Phospholipid transport system substrate-binding protein.
 
 
 0.986
SDW90068.1
Phospholipid transport system transporter-binding protein.
 
 0.980
SDX35302.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.968
SDW12132.1
Paraquat-inducible protein B.
  
 0.957
SDW54029.1
Anti-sigma-factor antagonist.
   
  0.941
SDX33858.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  0.941
SDW12072.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
0.933
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.