STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW96409.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
SDW96432.1
Nitrogen fixation protein NifX.
 
    0.946
SDW96498.1
Nitrogen fixation protein NifT.
 
     0.895
SDW96474.1
4Fe-4S binding domain-containing protein.
 
     0.873
SDW63275.1
SIR2-like domain-containing protein.
 
     0.800
SDW24985.1
Hypothetical protein.
 
     0.792
SDW25043.1
Nitrogen fixation protein NifZ.
 
    0.782
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
  
     0.763
SDX52077.1
Nitrogen fixation negative regulator NifL.
  
     0.762
SDW55260.1
Nitrogen fixation protein NifQ.
  
    0.754
SDX35044.1
Probable nitrogen fixation protein.
 
    0.749
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.