STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX07978.1Cu+-exporting ATPase. (504 aa)    
Predicted Functional Partners:
SDX71280.1
Cu+-exporting ATPase.
   
 0.982
SDX21499.1
Cu+-exporting ATPase.
 
0.929
SDW12260.1
Copper chaperone.
  
 0.905
SDW84837.1
Hypothetical protein.
  
 0.808
SDW02287.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.781
SDX14071.1
Hypothetical protein.
  
 
 0.778
SDX21680.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.778
SDW24216.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
   
  0.774
SDX21246.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
   
  0.774
SDX61964.1
Nitrite reductase (NADH) small subunit.
   
  0.774
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.