Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDX04736.1 | SDX04765.1 | SAMN05421783_11318 | SAMN05421783_11319 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.999 |
| SDX04736.1 | SDX04795.1 | SAMN05421783_11318 | SAMN05421783_11320 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center L subunit. | 0.999 |
| SDX04736.1 | SDX04868.1 | SAMN05421783_11318 | SAMN05421783_11323 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide a reductase subunit Z. | 0.929 |
| SDX04736.1 | SDX04893.1 | SAMN05421783_11318 | SAMN05421783_11324 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide a reductase subunit Y. | 0.786 |
| SDX04736.1 | SDX04915.1 | SAMN05421783_11318 | SAMN05421783_11325 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.786 |
| SDX04736.1 | SDX04941.1 | SAMN05421783_11318 | SAMN05421783_11326 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.778 |
| SDX04736.1 | SDX05374.1 | SAMN05421783_11318 | SAMN05421783_11344 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 3-vinyl bacteriochlorophyllide hydratase. | 0.785 |
| SDX04736.1 | SDX05417.1 | SAMN05421783_11318 | SAMN05421783_11346 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyll synthase. | 0.766 |
| SDX04736.1 | bchL | SAMN05421783_11318 | SAMN05421783_11340 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.717 |
| SDX04736.1 | bchN | SAMN05421783_11318 | SAMN05421783_11343 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Ferredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.766 |
| SDX04765.1 | SDX04736.1 | SAMN05421783_11319 | SAMN05421783_11318 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 0.999 |
| SDX04765.1 | SDX04795.1 | SAMN05421783_11319 | SAMN05421783_11320 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit. | 0.999 |
| SDX04765.1 | SDX04868.1 | SAMN05421783_11319 | SAMN05421783_11323 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit Z. | 0.947 |
| SDX04765.1 | SDX04893.1 | SAMN05421783_11319 | SAMN05421783_11324 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit Y. | 0.828 |
| SDX04765.1 | SDX04915.1 | SAMN05421783_11319 | SAMN05421783_11325 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.941 |
| SDX04765.1 | SDX04941.1 | SAMN05421783_11319 | SAMN05421783_11326 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.807 |
| SDX04765.1 | SDX05374.1 | SAMN05421783_11319 | SAMN05421783_11344 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 3-vinyl bacteriochlorophyllide hydratase. | 0.829 |
| SDX04765.1 | SDX05417.1 | SAMN05421783_11319 | SAMN05421783_11346 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyll synthase. | 0.800 |
| SDX04765.1 | bchL | SAMN05421783_11319 | SAMN05421783_11340 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.871 |
| SDX04765.1 | bchN | SAMN05421783_11319 | SAMN05421783_11343 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Ferredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.782 |
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