STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX09677.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
SDW46426.1
Hypothetical protein.
   
    0.684
SDW56389.1
Hypothetical protein.
   
    0.684
SDW70792.1
Adenosylcobinamide amidohydrolase.
  
     0.572
SDX52458.1
Hypothetical protein.
   
    0.567
SDW48373.1
Protein of unknown function.
  
     0.547
SDX34746.1
ATP-binding cassette, subfamily C, CydC.
    
  0.484
SDW62782.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
     0.447
SDX34762.1
ATP-binding cassette, subfamily C, CydD.
    
  0.441
SDX06094.1
Hypothetical protein.
  
     0.435
SDW93920.1
Methyl-accepting chemotaxis protein.
  
     0.424
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.