STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX14731.1Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (361 aa)    
Predicted Functional Partners:
SDW21108.1
TRAP transporter, DctM subunit.
 
 
 0.961
SDW21142.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
 0.956
SDW36280.1
C4-dicarboxylate transporter, DctM subunit.
  
 
 0.794
SDX14743.1
Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.783
SDW36343.1
C4-dicarboxylate-binding protein DctP.
  
 
0.708
SDW10608.1
TRAP transporter, 4TM/12TM fusion protein.
   
 
  0.639
SDW90537.1
Hypothetical protein.
   
 
 0.627
SDW10576.1
Hypothetical protein.
   
 
 0.614
SDW36315.1
C4-dicarboxylate transporter, DctQ subunit.
   
 
 0.612
SDW88910.1
Phage shock protein A (PspA) family protein.
    
  0.599
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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