STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX17969.1H+/gluconate symporter. (486 aa)    
Predicted Functional Partners:
SDX17863.1
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
    0.709
SDX17811.1
Acetate CoA/acetoacetate CoA-transferase beta subunit.
    0.704
SDW56865.1
Serine aminopeptidase, S33.
  
     0.595
SDW09508.1
Hypothetical protein.
  
  
 0.522
SDX30265.1
Propionate CoA-transferase.
 
     0.521
SDX11363.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
  
 0.520
SDW60473.1
Transcriptional regulator, GntR family.
 
  
 0.468
SDX30226.1
Protein of unknown function.
  
     0.466
SDX59518.1
PTS system, fructose-specific IIC component.
     
 0.416
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.