STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX24763.1Hydrogenase (NiFe) small subunit (hydA). (331 aa)    
Predicted Functional Partners:
SDX24790.1
Hydrogenase large subunit.
 0.999
SDW32157.1
Ni/Fe-hydrogenase 1 B-type cytochrome subunit.
 
 0.998
SDW12834.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.996
SDW32184.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.996
SDW67414.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.979
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.979
SDX24741.1
Two-component system, NtrC family, sensor histidine kinase HupT/HoxJ.
 
 
  0.935
SDW32107.1
Hydrogenase-1 operon protein HyaF.
 
 
 0.907
SDW53376.1
Nickel-dependent hydrogenase.
 
  
 0.880
hupD
Hydrogenase maturation protease; Not known. Could be involved in the processing of hydrogenase.
 
 
 0.876
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.