STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX26805.1Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. (1029 aa)    
Predicted Functional Partners:
SDX21624.1
Glycosyl hydrolase family 57.
 
 
  0.788
SDX26775.1
Cellobiose phosphorylase.
 
     0.772
SDX00739.1
Hypothetical protein.
  
     0.761
SDW84661.1
Starch synthase (maltosyl-transferring).
 
  
 0.746
SDW68613.1
Glycosyl hydrolase family 57.
 
 
  0.745
SDW37525.1
Alpha amylase, catalytic domain.
 
  
 0.732
SDW84585.1
Putative ATP-binding cassette transporter.
 
     0.709
SDX21644.1
Glycosyl hydrolase family 57.
 
 
  0.699
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.685
SDW54258.1
Putative ATP-binding cassette transporter.
 
     0.675
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.