STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX35647.1Ribulose 1,5-bisphosphate carboxylase small subunit. (114 aa)    
Predicted Functional Partners:
cbbL-2
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.997
cbbL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.995
SDX04617.1
Ribulose-bisphosphate carboxylase large chain.
 
 0.988
SDX53863.1
Phosphoribulokinase.
 
 
 0.928
SDW00904.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.850
SDW23386.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.850
SDX35672.1
Carboxysome shell peptide mid-region.
 
   
 0.834
SDX35712.1
Carboxysome peptide A.
 
 
 
 0.755
SDX35733.1
Carboxysome peptide B.
 
 
 
 0.753
SDW19901.1
Carbonic anhydrase.
    
 0.746
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.