STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX42001.1RES domain-containing protein. (233 aa)    
Predicted Functional Partners:
SDX42017.1
Protein of unknown function.
 
 
 0.981
SDW48928.1
Uncharacterized conserved protein, DUF2384 family.
 
 
 0.862
SDX40684.1
Uncharacterized conserved protein, DUF2384 family.
 
 
 0.861
SDW46181.1
Putative toxin-antitoxin system antitoxin component, TIGR02293 family.
  
 
 0.810
SDW55893.1
Hypothetical protein.
  
 
 0.656
SDW75029.1
Protein of unknown function.
   
 
 0.611
SDX41975.1
MOSC domain-containing protein.
       0.511
SDX42043.1
Hypothetical protein.
       0.450
SDX05846.1
phenylacetate-CoA ligase.
  
     0.438
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.