Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDW10194.1 | SDX42425.1 | SAMN05421783_101409 | SAMN05421783_12542 | Recombination protein RecA. | DNA polymerase V. | 0.766 |
| SDW38024.1 | SDX10459.1 | SAMN05421783_103262 | SAMN05421783_11450 | ATP-dependent DNA helicase DinG. | DNA polymerase-3 subunit delta'. | 0.927 |
| SDW38024.1 | SDX15785.1 | SAMN05421783_103262 | SAMN05421783_11594 | ATP-dependent DNA helicase DinG. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.921 |
| SDW38024.1 | SDX42425.1 | SAMN05421783_103262 | SAMN05421783_12542 | ATP-dependent DNA helicase DinG. | DNA polymerase V. | 0.850 |
| SDW38024.1 | polA | SAMN05421783_103262 | SAMN05421783_102109 | ATP-dependent DNA helicase DinG. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.993 |
| SDW67414.1 | SDX09859.1 | SAMN05421783_10713 | SAMN05421783_11423 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
| SDW67414.1 | SDX42425.1 | SAMN05421783_10713 | SAMN05421783_12542 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA polymerase V. | 0.808 |
| SDX09859.1 | SDW67414.1 | SAMN05421783_11423 | SAMN05421783_10713 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
| SDX09859.1 | SDX42425.1 | SAMN05421783_11423 | SAMN05421783_12542 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA polymerase V. | 0.824 |
| SDX09859.1 | polA | SAMN05421783_11423 | SAMN05421783_102109 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.496 |
| SDX10459.1 | SDW38024.1 | SAMN05421783_11450 | SAMN05421783_103262 | DNA polymerase-3 subunit delta'. | ATP-dependent DNA helicase DinG. | 0.927 |
| SDX10459.1 | SDX15785.1 | SAMN05421783_11450 | SAMN05421783_11594 | DNA polymerase-3 subunit delta'. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.997 |
| SDX10459.1 | SDX42425.1 | SAMN05421783_11450 | SAMN05421783_12542 | DNA polymerase-3 subunit delta'. | DNA polymerase V. | 0.879 |
| SDX10459.1 | polA | SAMN05421783_11450 | SAMN05421783_102109 | DNA polymerase-3 subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.977 |
| SDX15785.1 | SDW38024.1 | SAMN05421783_11594 | SAMN05421783_103262 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase DinG. | 0.921 |
| SDX15785.1 | SDX10459.1 | SAMN05421783_11594 | SAMN05421783_11450 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase-3 subunit delta'. | 0.997 |
| SDX15785.1 | SDX42425.1 | SAMN05421783_11594 | SAMN05421783_12542 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase V. | 0.989 |
| SDX15785.1 | polA | SAMN05421783_11594 | SAMN05421783_102109 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| SDX22089.1 | SDX42425.1 | SAMN05421783_11796 | SAMN05421783_12542 | DNA polymerase V; Belongs to the peptidase S24 family. | DNA polymerase V. | 0.890 |
| SDX42382.1 | SDX42425.1 | SAMN05421783_12540 | SAMN05421783_12542 | Repressor LexA; Belongs to the peptidase S24 family. | DNA polymerase V. | 0.755 |
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