STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX43880.1Predicted nucleic-acid-binding protein, contains PIN domain. (139 aa)    
Predicted Functional Partners:
SDX43864.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
       0.783
SDX43905.1
L-lactate dehydrogenase complex protein LldF.
       0.613
SDX43922.1
L-lactate dehydrogenase complex protein LldG.
       0.613
SDX43838.1
L-lactate dehydrogenase complex protein LldE.
       0.469
SDX37271.1
Type II restriction/modification system, DNA methylase subunit YeeA.
  
     0.427
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.