STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX43994.1Protein of unknown function. (394 aa)    
Predicted Functional Partners:
SDX44015.1
Protein of unknown function.
 
    0.969
SDX44042.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.962
SDX44063.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.962
SDW57280.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.907
SDW60748.1
Hypothetical protein.
  
     0.707
SDX44088.1
Chorismate lyase.
 
     0.700
SDX18620.1
Hypothetical protein.
  
     0.679
SDX10303.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
     0.676
SDW60225.1
Hypothetical protein.
  
     0.661
SDX09947.1
MerR HTH family regulatory protein.
  
     0.603
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.