Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW77223.1 | SDW77253.1 | SAMN05421783_108102 | SAMN05421783_108103 | Hypothetical protein. | Zinc/manganese transport system substrate-binding protein. | 0.906 |
SDW77223.1 | SDX14506.1 | SAMN05421783_108102 | SAMN05421783_11533 | Hypothetical protein. | Outer membrane efflux protein. | 0.408 |
SDW77223.1 | SDX46938.1 | SAMN05421783_108102 | SAMN05421783_12836 | Hypothetical protein. | Heme oxygenase. | 0.638 |
SDW77253.1 | SDW77223.1 | SAMN05421783_108103 | SAMN05421783_108102 | Zinc/manganese transport system substrate-binding protein. | Hypothetical protein. | 0.906 |
SDW77253.1 | SDX46938.1 | SAMN05421783_108103 | SAMN05421783_12836 | Zinc/manganese transport system substrate-binding protein. | Heme oxygenase. | 0.503 |
SDX05485.1 | SDX46938.1 | SAMN05421783_11349 | SAMN05421783_12836 | PAS fold. | Heme oxygenase. | 0.810 |
SDX11294.1 | SDX14506.1 | SAMN05421783_11485 | SAMN05421783_11533 | Protein of unknown function. | Outer membrane efflux protein. | 0.482 |
SDX11294.1 | SDX24083.1 | SAMN05421783_11485 | SAMN05421783_11836 | Protein of unknown function. | Esterase/lipase superfamily enzyme. | 0.700 |
SDX11294.1 | SDX32590.1 | SAMN05421783_11485 | SAMN05421783_12118 | Protein of unknown function. | Esterase/lipase superfamily enzyme. | 0.697 |
SDX11294.1 | SDX46938.1 | SAMN05421783_11485 | SAMN05421783_12836 | Protein of unknown function. | Heme oxygenase. | 0.546 |
SDX14506.1 | SDW77223.1 | SAMN05421783_11533 | SAMN05421783_108102 | Outer membrane efflux protein. | Hypothetical protein. | 0.408 |
SDX14506.1 | SDX11294.1 | SAMN05421783_11533 | SAMN05421783_11485 | Outer membrane efflux protein. | Protein of unknown function. | 0.482 |
SDX14506.1 | SDX24083.1 | SAMN05421783_11533 | SAMN05421783_11836 | Outer membrane efflux protein. | Esterase/lipase superfamily enzyme. | 0.764 |
SDX14506.1 | SDX32590.1 | SAMN05421783_11533 | SAMN05421783_12118 | Outer membrane efflux protein. | Esterase/lipase superfamily enzyme. | 0.765 |
SDX14506.1 | SDX46938.1 | SAMN05421783_11533 | SAMN05421783_12836 | Outer membrane efflux protein. | Heme oxygenase. | 0.417 |
SDX24083.1 | SDX11294.1 | SAMN05421783_11836 | SAMN05421783_11485 | Esterase/lipase superfamily enzyme. | Protein of unknown function. | 0.700 |
SDX24083.1 | SDX14506.1 | SAMN05421783_11836 | SAMN05421783_11533 | Esterase/lipase superfamily enzyme. | Outer membrane efflux protein. | 0.764 |
SDX24083.1 | SDX46938.1 | SAMN05421783_11836 | SAMN05421783_12836 | Esterase/lipase superfamily enzyme. | Heme oxygenase. | 0.438 |
SDX32590.1 | SDX11294.1 | SAMN05421783_12118 | SAMN05421783_11485 | Esterase/lipase superfamily enzyme. | Protein of unknown function. | 0.697 |
SDX32590.1 | SDX14506.1 | SAMN05421783_12118 | SAMN05421783_11533 | Esterase/lipase superfamily enzyme. | Outer membrane efflux protein. | 0.765 |
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