STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX48006.12-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. (344 aa)    
Predicted Functional Partners:
SDX47986.1
Methyltransferase, FkbM family.
 
     0.944
SDX09859.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.935
SDW67414.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.930
SDX48044.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.905
SDX48026.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.904
SDX48063.1
Hypothetical protein.
 
    0.899
SDX47957.1
Membrane glycosyltransferase.
 
     0.850
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
 
 0.809
SDX59566.1
Phosphocarrier protein FPr.
    
 0.754
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.733
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.