STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX49388.1Two-component system, OmpR family, sensor histidine kinase BaeS. (510 aa)    
Predicted Functional Partners:
SDX49383.1
Two-component system, OmpR family, response regulator BaeR.
 0.995
SDW45752.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
   
 0.953
SDW02191.1
PAS domain S-box-containing protein.
 
 
0.945
SDX34915.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.940
SDW13186.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.933
SDW21928.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.920
SDX67412.1
PAS domain-containing protein.
   
 0.906
SDW22379.1
Response regulator receiver domain-containing protein.
 
 0.892
SDX13829.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 0.888
SDW77423.1
Transcriptional regulator.
 
 0.886
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.