STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX52023.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
SDX52008.1
Hypothetical protein.
     0.962
SDX51987.1
AAA domain-containing protein, putative AbiEii toxin, Type IV TA system.
 
     0.734
SDW09737.1
Uncharacterised protein family (UPF0175).
  
     0.707
SDW69527.1
Uncharacterised protein family (UPF0175).
  
     0.707
SDX24927.1
Hypothetical protein.
  
     0.702
SDW35538.1
Hypothetical protein.
  
     0.641
SDX63277.1
Protein of unknown function.
  
     0.628
SDX18600.1
PD-(D/E)XK nuclease superfamily protein.
  
    0.609
SDX51401.1
Hypothetical protein.
  
     0.609
SDX50433.1
PD-(D/E)XK nuclease superfamily protein.
  
    0.603
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.