STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX54859.1Inner membrane protein. (364 aa)    
Predicted Functional Partners:
SDX54884.1
Hypothetical protein.
       0.774
SDX54909.1
Hypothetical protein.
       0.773
SDX54921.1
Hypothetical protein.
       0.773
SDX54951.1
Long-chain fatty acid transport protein.
       0.768
SDX54969.1
Hypothetical protein.
       0.768
SDX54830.1
Endonuclease YncB, thermonuclease family.
       0.762
SDW69471.1
mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system.
  
     0.704
SDX18620.1
Hypothetical protein.
  
     0.571
SDW54198.1
Putative transport protein.
  
     0.548
vapC-6
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.489
Your Current Organism:
Thiocapsa roseopersicina
NCBI taxonomy Id: 1058
Other names: DSM 217, T. roseopersicina, Thiocapsa floridana, Thiocapsa minima
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.